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GoMRI Synthesis Publications - Modeling

Number of Publications: 46


2021

Ainsworth, C., Chassignet, E., French-McCay, D., Beegle-Krause, C., Berenshtein, I., Englehardt, J., Fiddaman, T., Huang, H., Huettel, M., Justic, D., Kourafalou, V., Liu, Y., Mauritzen, C., Murawski, S., Morey, S., Özgökmen, T., Paris, C., Ruzicka, J., Saul, S., . . . Zheng, Y. (2021). Ten years of modeling the Deepwater Horizon oil spill. Environmental Modelling & Software, 142, 105070.
Technology, N. J. I. o., Boufadel, M., Bracco, A., Chassignet, E., Chen, S., D’Asaro, E., Dewar, W., Garcia-Pineda, O., Justić, D., Katz, J., Kourafalou, V., MacDonald, I., Özgökmen, T., Paris-Limouzy, C., Socolofsky, S., Halpern, D., & Shepherd, J. (2021). Physical Transport Processes that Affect the Distribution of Oil in the Gulf of Mexico: Observations and Modeling. Oceanography, 34(1), 58-75.
Daskiran, C., Cui, F., Boufadel, M. C., Socolofsky, S. A., Katz, J., Zhao, L., Ozgokmen, T., Robinson, B., & King, T. (2021). Transport of oil droplets from a jet in crossflow: Dispersion coefficients and Vortex trapping. Ocean Modelling, 158, 101736.
Dissanayake, A. L., Rezvani, M., Socolofsky, S. A., Bierlein, K. A., & Little, J. C. (2021). Bubble Plume Integral Model for Line-Source Diffusers in Ambient Stratification. Journal of Hydraulic Engineering, 147(5).
Dukhovskoy, D. S., Morey, S. L., Chassignet, E. P., Chen, X., Coles, V. J., Cui, L., Harris, C. K., Hetland, R., Hsu, T., Manning, A. J., Stukel, M., Thyng, K., & Wang, J. (2021). Development of the CSOMIO Coupled Ocean-Oil-Sediment- Biology Model. Frontiers in Marine Science, 8.
Pesch, S., Schulz, S., Aboud, N., & Schlüter, M. (2021). Experimental Investigation of Pure and Gas-Saturated Crude Oil Viscosity and Density from 268 to 308 K and Up to 23 MPa. Journal of Chemical & Engineering Data, 66(6), 2355-2365.
Quigg, A., Santschi, P. H., Xu, C., Ziervogel, K., Kamalanathan, M., Chin, W., Burd, A. B., Wozniak, A., & Hatcher, P. G. (2021). Aggregation and Degradation of Dispersants and Oil by Microbial Exopolymers (ADDOMEx): Toward a Synthesis of Processes and Pathways of Marine Oil Snow Formation in Determining the Fate of Hydrocarbons. Frontiers in Marine Science, 8.
Romero, I. C., Chanton, J. P., Brooks, G. R., Bosman, S., Larson, R. A., Harris, A., Schwing, P., & Diercks, A. (2021). Molecular Markers of Biogenic and Oil-Derived Hydrocarbons in Deep-Sea Sediments Following the Deepwater Horizon Spill. Frontiers in Marine Science, 8.
Solo-Gabriele, H. M., Fiddaman, T., Mauritzen, C., Ainsworth, C., Abramson, D. M., Berenshtein, I., Chassignet, E. P., Chen, S. S., Conmy, R. N., Court, C. D., Dewar, W. K., Farrington, J. W., Feldman, M. G., Ferguson, A. C., Fetherston-Resch, E., French-McCay, D., Hale, C., He, R., Kourafalou, V. H., . . . Yoskowitz, D. (2021). Towards integrated modeling of the long-term impacts of oil spills. Marine Policy, 131, 104554.
Thyng, K. M., Kobashi, D., Ruiz-Xomchuk, V., Qu, L., Chen, X., & Hetland, R. D. (2021). Performance of offline passive tracer advection in the Regional Ocean Modeling System (ROMS; v3.6, revision 904). Geoscientific Model Development, 14(1), 391-407.
Vaz, A. C., Faillettaz, R., & Paris, C. B. (2021). A Coupled Lagrangian-Earth System Model for Predicting Oil Photooxidation. Frontiers in Marine Science, 8.
Administration, N. O. a. A., Westerholm, D., Ainsworth, C., Barker, C., Brewer, P., Farrington, J., Justić, D., Kourafalou, V., Murawski, S., Shepherd, J., & Solo-Gabriele, H. (2021). Preparedness, Planning, and Advances in Operational Response. Oceanography, 34(1), 212-227.
Wilson, M. B., D.; Maung-Douglass, E. P., M.; Sempier, S. S., & T (2021). Advancements in understanding ocean circulation and tracking the movement of oil. Oil Spill Science: Sea Grant Programs of the Gulf of Mexico.
Wilson, M. B., D.; Maung-Douglass, E. P., M.; Sempier, S. S., & T (2021). From the ocean to humans: Integrated modelling of oil spill impacts. Oil Spill Science: Sea Grant Programs of the Gulf of Mexico.
Wilson, M. B., C.; Bailey, D. M., E.; Partyka, M. S., & S.; Skelton, T. (2021). Oil spill modelling: Preparedness and response. Oil Spill Science: Sea Grant Programs of the Gulf of Mexico.

2020

ACKLEH, A. S., Hossain, M. I., Veprauskas, A., & Zhang, A. (2020). Persistence of a Discrete-Time Predator-Prey Model with Stage-Structure in the Predator. In Springer Proceedings in Mathematics & Statistics (pp. 145-163) Springer International Publishing.
Aiyer, A., & Meneveau, C. (2020). Coupled population balance and large eddy simulation model for polydisperse droplet evolution in a turbulent round jet. Physical Review Fluids, 5(11).
Barker, C. H., Kourafalou, V. H., Beegle-Krause, C., Boufadel, M., Bourassa, M. A., Buschang, S. G., Androulidakis, Y., Chassignet, E. P., Dagestad, K., Danmeier, D. G., Dissanayake, A. L., Galt, J. A., Jacobs, G., Marcotte, G., Özgökmen, T., Pinardi, N., Schiller, R. V., Socolofsky, S. A., Thrift-Viveros, D., . . . Zheng, Y. (2020). Progress in Operational Modeling in Support of Oil Spill Response. Journal of Marine Science and Engineering, 8(9), 668.
Boufadel, M. C., Socolofsky, S., Katz, J., Yang, D., Daskiran, C., & Dewar, W. (2020). A Review on Multiphase Underwater Jets and Plumes: Droplets, Hydrodynamics, and Chemistry. Reviews of Geophysics, 58(3).
Bracco, A., Paris, C. B., Esbaugh, A. J., Frasier, K., Joye, S. B., Liu, G., Polzin, K. L., & Vaz, A. C. (2020). Transport, Fate and Impacts of the Deep Plume of Petroleum Hydrocarbons Formed During the Macondo Blowout. Frontiers in Marine Science, 7.
Grossi, M. D., Kubat, M., & Özgökmen, T. M. (2020). Predicting particle trajectories in oceanic flows using artificial neural networks. Ocean Modelling, 156, 101707.
Huntley, H. S., McMahon, C. W., Kuehl, J. J., & Kirwan, A. D. (2020). Cross-Shelf Transport Through the Interaction among a Coastal Jet, a Topographic Wave, and Tides. Fluids, 5(4), 181.
Jacketti, M., Englehardt, J. D., & Beegle-Krause, C. (2020). Application of the SOSim v2 Model to Spills of Sunken Oil in Rivers. Journal of Marine Science and Engineering, 8(9), 729.
Ji, C., Beegle-Krause, C. J., & Englehardt, J. D. (2020). Formation, Detection, and Modeling of Submerged Oil: A Review. Journal of Marine Science and Engineering, 8(9), 642.
Ji, C., Englehardt, J. D., & Beegle-Krause, C. J. (2020). Design of Real—Time Sampling Strategies for Submerged Oil Based on Probabilistic Model Predictions. Journal of Marine Science and Engineering, 8(12), 984.
Rohal, M., Ainsworth, C., Lupher, B., Montagna, P. A., Paris, C. B., Perlin, N., Suprenand, P. M., & Yoskowitz, D. (2020). The effect of the Deepwater Horizon oil spill on two ecosystem services in the Northern Gulf of Mexico. Environmental Modelling & Software, 133, 104793.
Shropshire, T. A., Morey, S. L., Chassignet, E. P., Bozec, A., Coles, V. J., Landry, M. R., Swalethorp, R., Zapfe, G., & Stukel, M. R. (2020). Quantifying spatiotemporal variability in zooplankton dynamics in the Gulf of Mexico with a physical–biogeochemical model. Biogeosciences, 17(13), 3385-3407.
Yang, Y., Weisberg, R. H., Liu, Y., & San Liang, X. (2020). Instabilities and Multiscale Interactions Underlying the Loop Current Eddy Shedding in the Gulf of Mexico. Journal of Physical Oceanography, 50(5), 1289-1317.

2019

Chiri, H., Abascal, A. J., Castanedo, S., Antolínez, J. A. A., Liu, Y., Weisberg, R. H., & Medina, R. (2019). Statistical simulation of ocean current patterns using autoregressive logistic regression models: A case study in the Gulf of Mexico. Ocean Modelling, 136, 1-12.
Berenshtein, I., Perlin, N., Ainsworth, C. H., Ortega-Ortiz, J. G., Vaz, A. C., & Paris, C. B. (2020). Comparison of the Spatial Extent, Impacts to Shorelines, and Ecosystem and Four-Dimensional Characteristics of Simulated Oil Spills. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Scenarios and Responses to Future Deep Oil Spills (pp. 340-354) Springer International Publishing.
Berenshtein, I., Perlin, N., Murawski, S. A., Joye, S. B., & Paris, C. B. (2020). Evaluating the Effectiveness of Fishery Closures for Deep Oil Spills Using a Four-Dimensional Model. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Scenarios and Responses to Future Deep Oil Spills (pp. 390-402) Springer International Publishing.
Dornberger, L. N., Ainsworth, C. H., Coleman, F., & Wetzel, D. L. (2020). A Synthesis of Top-Down and Bottom-Up Impacts of the Deepwater Horizon Oil Spill Using Ecosystem Modeling. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Deep Oil Spills (pp. 536-550) Springer International Publishing.
Jacketti, M. J., C.; Englehardt, J. B., & C.J (2019). Development of the SOSim Model for Inferential Tracking of Subsurface Oil. Proceedings of the Forty-second AMOP Technical Seminar, Environment and Climate Change Canada, Ottawa, ON, Canada, 485-501.
Ortega-Ortiz, J. G., Ainsworth, C. H., & Gracia, A. (2020). Comparing Ecosystem Model Outcomes Between Ixtoc 1 and Deepwater Horizon Oil Spills. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Deep Oil Spills (pp. 551-568) Springer International Publishing.
Paris, C. B., Vaz, A. C., Berenshtein, I., Perlin, N., Faillettaz, R., Aman, Z. M., & Murawski, S. A. (2020). Simulating Deep Oil Spills Beyond the Gulf of Mexico. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Scenarios and Responses to Future Deep Oil Spills (pp. 315-336) Springer International Publishing.
Socolofsky, S. A., Gros, J., North, E., Boufadel, M. C., Parkerton, T. F., & Adams, E. E. (2019). The treatment of biodegradation in models of sub-surface oil spills: A review and sensitivity study. Marine Pollution Bulletin, 143, 204-219.
Suprenand, P. M., Hoover, C., Ainsworth, C. H., Dornberger, L. N., & Johnson, C. J. (2020). Preparing for the Inevitable: Ecological and Indigenous Community Impacts of Oil Spill-Related Mortality in the United States’ Arctic Marine Ecosystem. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Scenarios and Responses to Future Deep Oil Spills (pp. 470-493) Springer International Publishing.
Vaz, A. C., Paris, C. B., Dissanayake, A. L., Socolofsky, S. A., Gros, J., & Boufadel, M. C. (2020). Dynamic Coupling of Near-Field and Far-Field Models. In Murawski, S. A., Ainsworth, C. H., Gilbert, S., Hollander, D. J., Paris, C. B., Schlüter, M., & Wetzel, D. L. (Eds.), Deep Oil Spills (pp. 139-154) Springer International Publishing.

2018

Morzaria-Luna, H. N., Ainsworth, C. H., Tarnecki, J. H., & Grüss, A. (2018). Diet composition uncertainty determines impacts on fisheries following an oil spill. Ecosystem Services, 33, 187-198.
Mississippi, U. o. S., Greer, A., Shiller, A., Hofmann, E., Wiggert, J., Warner, S., Parra, S., Pan, C., Book, J., Joung, D., Dykstra, S., Krause, J., Dzwonkowski, B., Soto, I., Cambazoglu, K., Deary, A., Briseño-Avena, C., Boyette, A., Kastler, J., . . . Graham, W. (2018). Functioning of Coastal River-Dominated Ecosystems and Implications for Oil Spill Response: From Observations to Mechanisms and Models. Oceanography, 31(3).
Ainsworth, C. H., Paris, C. B., Perlin, N., Dornberger, L. N., Patterson, W. F., Chancellor, E., Murawski, S., Hollander, D., Daly, K., Romero, I. C., Coleman, F., & Perryman, H. (2018). Impacts of the Deepwater Horizon oil spill evaluated using an end-to-end ecosystem model. PLOS ONE, 13(1), e0190840.
Chapman, P., DiMarco, S., Hetland, R., & Socolofsky, S. (2018). From Bubbles to Beaches: An Integrated Modeling Approach to Oil Spill Response. Marine Technology Society Journal, 52(6), 91-94.
Chen, B., Yang, D., Meneveau, C., & Chamecki, M. (2018). Numerical study of the effects of chemical dispersant on oil transport from an idealized underwater blowout. Physical Review Fluids, 3(8).
Desai, N., & Ardekani, A. M. (2018). Combined influence of hydrodynamics and chemotaxis in the distribution of microorganisms around spherical nutrient sources. Physical Review E, 98(1).
Dissanayake, A. L., Burd, A. B., Daly, K. L., Francis, S., & Passow, U. (2018). Numerical Modeling of the Interactions of Oil, Marine Snow, and Riverine Sediments in the Ocean. Journal of Geophysical Research: Oceans, 123(8), 5388-5405.
Dissanayake, A. L., Gros, J., & Socolofsky, S. A. (2018). Integral models for bubble, droplet, and multiphase plume dynamics in stratification and crossflow. Environmental Fluid Mechanics, 18(5), 1167-1202.